mummergpu

MUMmerGPU

MUMmerGPU is an high-throughput parallel pairwise local sequence alignment program. It uses the GPU to simultaneously align multiple query sequences against a single reference sequence stored as a suffix tree.

Michael Schatz and Cole Trapnell from Center for Bioinformatics and Computation Biology, University of Maryland College Park, contributes the MUMmerGPU implementation to Rodinia

Link: http://mummergpu.sourceforge.net

  • mummergpu.txt
  • Last modified: 2018/10/03 17:39
  • by 127.0.0.1